CADO
Draw domain graph
Compare domain graphs
Phylogenetic profiling
Withdraw proteins
The procedure for comparing domain graphs
Type the domain(s) as 'baiting domain(s)'
Add space(s)
between
domain names
(
case sensitive!
) , e.g., ABC_tran Fer4
This input is
Optional
: if domains are given, the component containing the input domains is shown; otherwise, the largest component will be shown
Type the organisms (using codes, check
codes
) to be compared
Add space(s)
between
organisms
(
case sensitive!
) , e.g., Mka Pho
No more than
3
organisms are
preferred
Select graphic view mode:
neighbors
all
In
neighbors
mode, only domains having direct connections with
baiting domain(s)
are included in the domain graph;
while in
all
mode, all domains in the same component(s) as that of baiting domain(s) are included in the domain graph.
Force to create a domain graph no matter how big it is.
Press the button to view the domain graph
or reset the parameters
Ye Lab
|
School of Informatics, Indiana University, Bloomington
|
Questions/Comments?
|
CADO at Burnham